Insertion junction: CLIP2.023358_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023358
Chromosome:chromosome 17
Location:1709880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708300 RPN12 (1 of 1) K03031 - 26S proteasome regulatory subunit N12 (PSMD8, RPN12); 26S proteasome regulatory subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACGGAGGCCACCGAGGGGACCACGGCGTCCAAGGCCATTCCCTCGC
Internal bar code:GCAGCGGTGGGTACGTCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2580
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGTCTTCGACGCCCAT
Suggested primer 2:AGTTACGTGTCCGGTGCATT