Insertion junction: CLIP2.023358_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023358
Chromosome:chromosome 17
Location:1709883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708300 RPN12 (1 of 1) K03031 - 26S proteasome regulatory subunit N12 (PSMD8, RPN12); 26S proteasome regulatory subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAACACAACGTACCCGTCCACGACCGCCCAGTTGTGCTGCAGCGCACC
Internal bar code:GCAGCGGTGGGTACGTCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2630
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTACGTGTCCGGTGCATT
Suggested primer 2:AACAAGTCTTCGACGCCCAT