Insertion junction: CLIP2.023359_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023359
Chromosome:chromosome 3
Location:4551672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176200 (1 of 1) PTHR22904//PTHR22904:SF364 - TPR REPEAT CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTCCGGCTTTTAGGCCCTCAATTAACCGGTGCACTTCGTCAACATTCT
Internal bar code:CCAACATTCTCTCAAGACCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4432
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TACATCCGTCTTAGGGGCCA
Suggested primer 2:CTCGTCGTCTGGACACCAAA