Insertion junction: CLIP2.023362_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023362
Chromosome:chromosome 3
Location:8973000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203793 GT90-35,GT90F35 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 35 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGCACATGGCACGGCGGCATGCGCGCGGCAAGTAACGGGGTTGGGC
Internal bar code:AGGGTTTAATCACCGCGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAACACCCAACACACAT
Suggested primer 2:CGTGTGCATGGTTTGGGAAG