Insertion junction: CLIP2.023369_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023369
Chromosome:chromosome 6
Location:3483259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278110 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTGAGGGCGGCGGCGGTGGGCGCGACGGGTAGCCTGTTGGGGCCGC
Internal bar code:AGGTGTTTCAATTATTGCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1478
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAACACACATATGCTGCG
Suggested primer 2:TGGGTCGGTAGTTCGTGTTG