Insertion junction: CLIP2.023372_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023372
Chromosome:chromosome 5
Location:2764019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g240750 TEF17 Predicted protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGAGGCAGAACTGCAAGCTGCCAATAAGGCCTGCTCCCATCTCGACTC
Internal bar code:TGGTTGCGCTAGGGGGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCAGAGGTGTTCACGT
Suggested primer 2:GAAAACGGGCCTGGTTTGTC