Insertion junction: CLIP2.023379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023379
Chromosome:chromosome 9
Location:6734009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417050 (1 of 12) IPR008928 - Six-hairpin glycosidase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTACGGTGTCAGCTACATTACTGGCATACAGCGCACCTGCTCCCAGCA
Internal bar code:GCCCTCTAATACTGTGACGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5328
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGCGTGCATGTGATAC
Suggested primer 2:TGTGCAGAGGACGAAGCAAT