Insertion junction: CLIP2.023380_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023380
Chromosome:chromosome 2
Location:223611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800153 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCAGCCCTGCGTCGATGCGCGACACAACCTGCCGCACACGCCCCTG
Internal bar code:TTAGTTTTCTATCCGAGCCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2503
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCAGATGCCCAGTGAC
Suggested primer 2:GTGAGTGGGAGTGCAGAGTC