Insertion junction: CLIP2.023386_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023386
Chromosome:chromosome 17
Location:4008748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728400 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACGCACTGCCACAGACCTTCTTGGGGTCATCTACACCTCCAGTCTGT
Internal bar code:TCTCGCGTCTTTGAATAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:67
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGAAACCACTTGTCAC
Suggested primer 2:CAGCACCAGCAACGAAAGAG