Insertion junction: CLIP2.023386_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023386
Chromosome:chromosome 17
Location:4008792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728400 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGCTGGAAGGCCAGGGCGCACGTACGCGCATTGCGTGTGTCATGAC
Internal bar code:TCTCGCGTCTTTGAATAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1150
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACCAGCAACGAAAGAG
Suggested primer 2:GCACGGAAACCACTTGTCAC