Insertion junction: CLIP2.023390_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023390
Chromosome:chromosome 5
Location:1522271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234660 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTCTGGCCTGTGGTGTGGTTGTAGGAAGGAAGAGTGAGAGGTAACC
Internal bar code:CCCACACGATGGGTCGGAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2685
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGACGCTGTATCGGGAG
Suggested primer 2:TTGAGGTCCAGGAACATGCC