Insertion junction: CLIP2.023402_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023402
Chromosome:chromosome 4
Location:1472645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g213950 SRR23 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTGCTGCGGCGGACGTAGCGGTTGGGGGCGCCGCCAGCGGCCAGCC
Internal bar code:CACGGGGGCTTGGAATCGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTTACAAGTTTCCGGGG
Suggested primer 2:TCGAGGATACCGGAGCTCAT