Insertion junction: CLIP2.023417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023417
Chromosome:chromosome 10
Location:900267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423950 (1 of 1) PTHR12952//PTHR12952:SF0 - SYS1 // PROTEIN SYS1 HOMOLOG-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGGGGTCCGGGGCAGGTGGGGATGGAGTCGCCGCAGTTAGCCCGGG
Internal bar code:CAGTGGGGCCTGCGGTCTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGCCCTCTCAACGTATC
Suggested primer 2:CATGTGGACCGAGGGATAGC