Insertion junction: CLIP2.023422_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023422
Chromosome:chromosome 2
Location:5269993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCGGGCGGGCGTGAGCGGCGCCCCCGTGGTGGCGGACTCGGAAGCG
Internal bar code:CTCTCAACGAGGCGATAACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGTTGCAGACGTACAA
Suggested primer 2:GAGGAGAGCGTGGTCTATGC