Insertion junction: CLIP2.023428_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023428
Chromosome:chromosome 14
Location:1813123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619613 (1 of 1) PF04855 - SNF5 / SMARCB1 / INI1 (SNF5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCTCTTCCCTGTCCCCTTGTCCTCACTTGCTATTGCGGGCGCAACGCC
Internal bar code:GCCGTAATATTTATATCAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCAGGGATGGGCATAGT
Suggested primer 2:ATGAAGCTTGCATGCTGCTG