Insertion junction: CLIP2.023443_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023443
Chromosome:chromosome 9
Location:5450287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408650 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGCGTGGCTGACTCACCAGCGGGCTCAGCGCCAGGTCGTGGTGTGA
Internal bar code:GCACTGCGGACTACGGTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGGTTTTGAGCCTGTC
Suggested primer 2:CAGCTCCTCCTCCTCCTCTT