Insertion junction: CLIP2.023447_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023447
Chromosome:chromosome 14
Location:2324826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g622900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCCCTTGCCTTGCTTGCTCGCCATGCTCTGTCGACGGCGAGGGATG
Internal bar code:TTGTGTTGGCTTGCTGTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGCACTGGCATACCT
Suggested primer 2:ACGGACAATCACACAGGCAT