Insertion junction: CLIP2.023449_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023449
Chromosome:chromosome 4
Location:3161617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226114 (1 of 29) IPR029055 - Nucleophile aminohydrolases, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGCCATGGTGGGTTGGCTGGGCAAGTTTCACAACCGAACACTGCAG
Internal bar code:CCCATCACTTAAAATGGGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2305
LEAP-Seq percent confirming:91.8919
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCACTTTTCCCTTGCAAG
Suggested primer 2:CGAAGAGAGGAGTGAGGGGA