Insertion junction: CLIP2.023454_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023454
Chromosome:chromosome 10
Location:4910881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCTTTGACGTGCGCCGCGTGTATGCTTCTTACTGATACAGACGCCA
Internal bar code:CATGTTCTCCGCGACGATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:67.3913
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCCCCCACATACCTAA
Suggested primer 2:GGACTCGCAACTGCTAAGGT