Insertion junction: CLIP2.023454_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023454
Chromosome:chromosome 10
Location:4910882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGAGGCTATAGAGATGCATGTGACGCCGCCGTGTAAACTGACGGTAG
Internal bar code:CATGTTCTCCGCGACGATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5980
LEAP-Seq percent confirming:4.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:144
LEAP-Seq n unique pos:150

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTCGCAACTGCTAAGGT
Suggested primer 2:CCCCTCCCCCACATACCTAA