Insertion junction: CLIP2.023479_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023479
Chromosome:chromosome 2
Location:3442927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098750 (1 of 7) PF00027//PF00520 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACGAAGTCGTTACCAAAGGAGCGGCCGTTGGGGCGGGGGCGGGGA
Internal bar code:GGGAACTGGTATAGCGGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCCTCCACATAAGCCTA
Suggested primer 2:GGAGCCATGGACCGACATAG