Insertion junction: CLIP2.023482_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023482
Chromosome:chromosome 12
Location:5093133
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526559 (1 of 6) IPR000719//IPR002290//IPR011009//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGCCGCGGGTGCGTGCCGCCCTGGGCGCGCGCGACGCGGCCATTGCT
Internal bar code:CAGACTGCATCGCGTTCGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2603
LEAP-Seq percent confirming:40.6593
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCATCCTCCACAACTC
Suggested primer 2:CCGTCAAGTGCAATACCCCT