Insertion junction: CLIP2.023484_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023484
Chromosome:chromosome 13
Location:2655834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581300 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGATCTCAGGCAGGGGCATCAGTCCAAGCCAGCAGCGCGCTGGTCGA
Internal bar code:CTCCCGAGTAGTGTGCAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2613
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGATAAAGATGCGGATGC
Suggested primer 2:GCAGATGTCTTTGGCGGTTG