Insertion junction: CLIP2.023494_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023494
Chromosome:chromosome 11
Location:2072979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467756 MMP5 Metalloproteinase of VMP family; (1 of 51) PF05548 - Gametolysin peptidase M11 (Peptidase_M11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGAAATGGGATAGGTGGAAGTGAGTGACAGGGAGCTGGAGCGGGAG
Internal bar code:ATGAATTGTGAGGAATGGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:911
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCACGTACGGCAAGAACAT
Suggested primer 2:ATACCCCCTACCCTGTGACC