Insertion junction: CLIP2.023502_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023502
Chromosome:chromosome 1
Location:6378092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045200 (1 of 1) 5.3.99.6 - Allene-oxide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGGCGGTGGGCGCGGCAGCCACAAGCGCGGCGGTTAGACCGCTATG
Internal bar code:CGGAATCTATAGCGGCGTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAACATAACCGCCACT
Suggested primer 2:TACTCCCTTGCTTGCATGGG