Insertion junction: CLIP2.023504_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023504
Chromosome:chromosome 11
Location:1956621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467778 (1 of 1) K00761 - uracil phosphoribosyltransferase (upp, UPRT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCACGTCAGACGCCTCTCGACCCTACCCCCATGACCCACAGCCGCACG
Internal bar code:TGTAGTCGCTTAGGTAGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1723
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCATTCTTGAGCATGCT
Suggested primer 2:CGGGCTTTCGTTTCGTTGTT