Insertion junction: CLIP2.023506_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023506
Chromosome:chromosome 16
Location:432279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693300 3'UTR
Cre16.g801869 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGCGGAGCACCCCGAAGATTCTACAGCTTGCTCTGGCATGTTTAATCC
Internal bar code:GCCGTAGCCATGCCGTGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:780
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCTGAGCTTCATGGCT
Suggested primer 2:CTCGCACACTTTTTGCAGCT