Insertion junction: CLIP2.023506_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023506
Chromosome:chromosome 16
Location:432284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693300 3'UTR
Cre16.g801869 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGGCATCGTGTCAACTCCTAAACATGGAATCCCAAGGAGTGCAGGAA
Internal bar code:GCCGTAGCCATGCCGTGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3362
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCACACTTTTTGCAGCT
Suggested primer 2:ACTTGCTGAGCTTCATGGCT