Insertion junction: CLIP2.023511_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023511
Chromosome:chromosome 10
Location:5114401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455231 CSR4 Carbohydrate sulfotransferase-related 4; (1 of 1) 2.8.2.23 - [Heparan sulfate]-glucosamine 3-sulfotransferase 1 / Heparin-glucosamine 3-O-sulfotransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTGCCGTAATTCTGCATCGCATACACTGTCCTACGCGTAATGTTTTC
Internal bar code:GTGAAATAGTGTTGGATCAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCACTGCATCAACATCCT
Suggested primer 2:CTCCTGCCCAAACCACCTAG