Insertion junction: CLIP2.023518_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023518
Chromosome:chromosome 8
Location:4210856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384000 CYP26,CYP771A1 (1 of 3) IPR001128//IPR002397//IPR002401//IPR002403 - Cytochrome P450 // Cytochrome P450, B-class // Cytochrome P450, E-class, group I // Cytochrome P450, E-class, group IV; Cytochrome P450, CYP197 superfamily 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTCCATGTGTAGCAGACTGTATAAGTACAACTCACGATGCAAGGGCA
Internal bar code:GCACGATCAAGGTAGCTCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1095
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAGCAAACGAACAGGTG
Suggested primer 2:CAAGTGGGTTTGGCTTCTGC