Insertion junction: CLIP2.023524_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023524
Chromosome:chromosome 2
Location:3649941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099950 (1 of 6) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCAGGATTCAGTGCAAGGAAGTTGCAAGTGGCGGGGCGCAACACAGTG
Internal bar code:CTCCAACGTTAAGGTGGGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAATGCGGTCAGTGTAGG
Suggested primer 2:TCCCAAGCACCTCGTTGTAC