Insertion junction: CLIP2.023528_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023528
Chromosome:chromosome 11
Location:942875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467659 (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAGTGAGAAGGGAAGCTTCACAGGAATGGGGTGGGGAACGCCCCTC
Internal bar code:TGTCTGTTATTGAATGTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2070
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCATGCATGTGCCGATG
Suggested primer 2:GAGCAATGGAGAGCAAGGGT