Insertion junction: CLIP2.023530_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023530
Chromosome:chromosome 17
Location:3830383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727335 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAACATCACCGAGTGCTCCAAAGACAACAAAGAAGCCCAACTGCAAA
Internal bar code:GACCTCCAATCACGTCGGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACACATAGTCCATGCGT
Suggested primer 2:TCGTCGCACTTCAGCTTTCT