Insertion junction: CLIP2.023535_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023535
Chromosome:chromosome 6
Location:2398366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268550 GTR,CGL121,CSL1 Cellulose-synthase-like 1; (1 of 1) 2.4.1.32 - Glucomannan 4-beta-mannosyltransferase / Glucomannan-synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGGGCTGCTGGCTGGGGGTACAGTGTATGCCGCGCGCCACCCGCAC
Internal bar code:TATATCATTCGCGAAGCGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:27.5862
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCTGCACCTTACTGTC
Suggested primer 2:GGGGATGAGAGGGAGGAAGT