Insertion junction: CLIP2.023538_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023538
Chromosome:chromosome 7
Location:4997740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347300 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGCGAAATCACTCGCCCTGGCAACCACTTTGCGCCGGCTGTATGTG
Internal bar code:ACGTGGTTAGCCAGTGCGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3906
LEAP-Seq percent confirming:15.0943
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCAGGGCGGGTGATTTC
Suggested primer 2:CGACGAGGAGGATGAAGAGC