Insertion junction: CLIP2.023545_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023545
Chromosome:chromosome 3
Location:1972655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155550 DNJ18 (1 of 1) IPR001623//IPR012336 - DnaJ domain // Thioredoxin-like fold; DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTATTTCGGCATGCGCTGCGTTTGACCCGCGACCGCTCAGCTCGCTCG
Internal bar code:ACTCACACGTGTTTTCTTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4202
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATGAAAGCAGACGATGG
Suggested primer 2:CTCCCGTCGTCAAGTATCCG