Insertion junction: CLIP2.023551_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023551
Chromosome:chromosome 9
Location:42359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386137 (1 of 1) PF06824 - Protein of unknown function (DUF1237) (DUF1237) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATCACGGTGTATCACGGGCCTGCATACGCACAGTCCTTGAAAACAAT
Internal bar code:CTAAGAGCTTTCCTGTTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCGCTGTCCATGCAAGA
Suggested primer 2:TTCCTGACTCAGCAGTGCAG