Insertion junction: CLIP2.023554_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023554
Chromosome:chromosome 7
Location:3229779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334150 (1 of 1) PTHR23097//PTHR23097:SF124 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGACGCAGGCAGGCACGCAGGCAGGCAGGCACGGACAGGGGCAATC
Internal bar code:GTGTATTAGCAGAAGCGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTCGTACTCATCCACG
Suggested primer 2:CCTCCGACCGTGGATGTATG