Insertion junction: CLIP2.023559_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023559
Chromosome:chromosome 3
Location:4584072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCGGGGGTGGGGGCGGAGGGCGGAGATGCTAGCTGCTGGAAGCACC
Internal bar code:CAATGTCGACGTTAGTTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGAGCTGCTGCGGATTC
Suggested primer 2:CGCGCTAACATGTTCCTTCG