Insertion junction: CLIP2.023573_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023573
Chromosome:chromosome 4
Location:1106533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216050 (1 of 3) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTATGGGTTTGGGTAAGTTTGCGGCTCGTCCGCGCCTCTCACCATCT
Internal bar code:GGTCGGAGAGCAAATGAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3064
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCACATGTGGCCGAATC
Suggested primer 2:CTGGAGGTTGGCACGTAACT