Insertion junction: CLIP2.023573_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023573
Chromosome:chromosome 4
Location:1106544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216050 (1 of 3) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCACGCGCACACGCACACTCACACATACCCAGTGTGCCTTCATGACA
Internal bar code:GGTCGGAGAGCAAATGAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGGTTGGCACGTAACT
Suggested primer 2:GATGCACATGTGGCCGAATC