Insertion junction: CLIP2.023574_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023574
Chromosome:chromosome 6
Location:3989252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278208 (1 of 1) PF04845 - PurA ssDNA and RNA-binding protein (PurA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGTCCTCAACCATTAACACCCGCGCACCCAAGGTACGGCAGCACGCC
Internal bar code:TACGAATCAATCCATCCCAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:93.0233
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGTCAAAAGCCCCCAGC
Suggested primer 2:GCGGCGCATTCGTTCTTATT