Insertion junction: CLIP2.023578_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.023578
Chromosome:chromosome 8
Location:863883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g361350 (1 of 3) PF01936 - NYN domain (NYN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAATTTAAATAAATGCAAACTAAAGCAATTGTTCTAAATGGCGTGCG
Internal bar code:TGCGTAAATAGCGAGACCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:243
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCGTACCGTACCGTAC
Suggested primer 2:TGTGTGTGTGTGGCTTCTGT