Insertion junction: CLIP2.023580_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.023580
Chromosome:chromosome 15
Location:643165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636896 (1 of 1) PTHR11082//PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE // TRNA-DIHYDROURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCAAGGGCTTCTGCGAGGGCTGTTGAGCTGCTGAGCCGAGGGGCGG
Internal bar code:AGGGAGCCACTATGAGAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACCATCCGTAGCTAGCCAG
Suggested primer 2:ATGCCTTGAAGTCAGAGCCC