Insertion junction: CLIP2.023586_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.023586
Chromosome:chromosome 14
Location:1623227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801618 (1 of 1) PTHR24223//PTHR24223:SF232//PTHR24223:SF252 - FAMILY NOT NAMED // SERINE PROTEASE/ABC TRANSPORTER B FAMILY PROTEIN TAGB-RELATED // PROTEIN MRP-2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGGAGGCGGCGCCAGTGGTACGGGCCTTCGGCGCACAGCCTTACTTT
Internal bar code:GGGCCATTCCCCCAGTTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:122
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTGGAGGTAAGGCAAT
Suggested primer 2:CACCTCCCAATCCCCACTTC