Insertion junction: CLIP2.023600_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.023600
Chromosome:chromosome 16
Location:2865019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662951 (1 of 1) PF06985//PF12796//PF13637 - Heterokaryon incompatibility protein (HET) (HET) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGCGCGTGCGCAGTCTCGACAGAAGCACTGCCGCAACCTGTCTGTG
Internal bar code:GCGAGTTCTATGTAGGTTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATGCGAATGGGAGTG
Suggested primer 2:ACGAGCGTGTGTGTGTGTAT