Insertion junction: CLIP2.023605_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023605
Chromosome:chromosome 17
Location:5161967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736750 (1 of 2) PTHR22640//PTHR22640:SF2 - UNCHARACTERIZED // STRUCTURAL MAINTENANCE OF CHROMOSOMES FLEXIBLE HINGE DOMAIN-CONTAINING PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGTCCGTCGCACGTGTACCGCACGCGACTCTGCAGCGGGGGAACAG
Internal bar code:GTTGGCATATGGAGTAGTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGAAAGACCACACCTACG
Suggested primer 2:GCACAGCGGCTGTCTTTATG