Insertion junction: CLIP2.023607_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.023607
Chromosome:chromosome 9
Location:1906281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397350 RAD3A,XPD3 (1 of 1) K15362 - fanconi anemia group J protein (BRIP1, BACH1, FANCJ); RAD3/XP-D family DNA-binding helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGGAGCAGGCGCCGCGACGGCCGGCGGCGGCGGCACGTCACGCCC
Internal bar code:CGTGCAGCAGTAGCCAGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4344
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCGCCTCGTGAAGAAGTG
Suggested primer 2:GCGGAACACTGTTCAACCAC