Insertion junction: CLIP2.023611_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.023611
Chromosome:chromosome 11
Location:42979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467526 (1 of 36) PF00583 - Acetyltransferase (GNAT) family (Acetyltransf_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAAGGTAAGGGTATGGGAGTGCCGTAGACTGAGAGGGCCGCTCTTT
Internal bar code:ATTGCAGTTTCTCGCACCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2119
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACAGCGAAGTGAGGAA
Suggested primer 2:TCGCGTTCATCCTTCACACA