Insertion junction: CLIP2.023628_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023628
Chromosome:chromosome 9
Location:3777966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397586 (1 of 2) IPR000719//IPR001245//IPR002290//IPR011009//IPR017986//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // WD40-repeat-containing domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGTACGCTACAGCCGCACGCAGCCGGAGGTGCTGGCTACGGCAGTG
Internal bar code:TCTTCAGTGAGCATGGCTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTCCAGAAGTTCGCAA
Suggested primer 2:GACAAGGGTATCTAGGGCGC